This section presents a summary of the data import step.
Data type | .idat files |
Data source | ~/meth48/idatfiles |
Number of samples | 48 |
Number of probes | 866895 |
Detection p-values | present |
bead counts information is | present |
Quality control information | absent |
The loaded dataset includes a table of sample annotations describing the following traits:
No. | Trait | Missing Values | Type |
1 | Sample_ID | identifiers or text | |
2 | Sample_Plate | all identical | |
3 | Sample_Group | categories or text | |
4 | Sentrix_ID | numbers | |
5 | Sentrix_Position | categories or text | |
6 | Tiss_Subprim | categories or text | |
7 | NT | categories or text | |
8 | barcode | identifiers or text | |
9 | Predicted Male Probability | numbers or identifiers | |
10 | Predicted Sex | categories or text |
The full sample annotation table is available as a comma-separated value file accompanying this report.