Data Import


This section presents a summary of the data import step.

Data type .idat files
Data source ~/meth48/idatfiles
Number of samples 48
Number of probes 866895
Detection p-values present
bead counts information is present
Quality control information absent

Sample Annotation

The loaded dataset includes a table of sample annotations describing the following traits:

No. Trait Missing Values Type
1 Sample_ID identifiers or text
2 Sample_Plate all identical
3 Sample_Group categories or text
4 Sentrix_ID numbers
5 Sentrix_Position categories or text
6 Tiss_Subprim categories or text
7 NT categories or text
8 barcode identifiers or text
9 Predicted Male Probability numbers or identifiers
10 Predicted Sex categories or text

The full sample annotation table is available as a comma-separated value file accompanying this report.